Programme Jour 1 / Program Day 1 (22.05.2023)
08.00 – 09.00
Accueil et enregistrement des participants / Registration of the participants
09H00 – 09H15
Accueil et installation des autorités / Welcome of the authorities
09H15 – 10H00
1- Mot de bienvenue du Maire de Yamoussoukro / Word of welcome from the Mayor of Yamoussoukro
2- Message du Président de ISME / Message from the sponsor (ISME President)
3- Message du DG de l’INP-HB / Message from INP-HB Manager
4- Message du Ministre (MESRS-CI) / Message from the Minister of Higher Education and Scientific Research of Côte d’Ivoire
10H00 – 10H30
Pause-Café et Photos / Coffee break & Photos
10H30 – 12H00
Prof. Mohammed HIJIRI
Mohammed VI Polytechnic University (UM6P), Morocco
Conférence plénière / Plenary Conference: Microbial ecology, an asset for sustained ecosystem services
12H00 – 13H30
Déjeuner / Lunch
SEMINAR 1 : Soil, Plant & Food / beverage Microbial Ecology in the omics age
13H30 – 14H00
Prof. Theo SMITS
Zurich University of Applied Sciences (ZHAW), Switzerland
Keynote Séminaire 1 / Seminar 1 :Application of -omics technologies in plant-microbe interaction: the example of Xanthomonas fragariae
14H00 – 14H30
Mrs. Emma AMON-BEHOU INP-HB, Côte d’Ivoire
Metagenomic analysis of soil bacteriobiome in Côte d’Ivoire
14H30 – 15H00
Dr. Romain FOSSOUINP-HB, Côte d’Ivoire
Insights into the ecology of rhizobia in Côte d’Ivoire soils
15H00 – 15H30
Prof. Olubukola Oluranti BABALOLA North-West University, South Africa
The Role of Rhizobacteria in Plant Adaptation to Drought and Environmental Change
15H30 – 16H00
Prof. N’Dédé Théodore DJENI University of Nandjui Abrogoua, CI
Advances in culture-independent analysis of food/beverage microbial ecology using metagenomics : case of palm wines
16H00 – 16H30
Pause-Café / Coffee break
SEMINAR 2 : Human and Animal Microbial Ecology
16H30 – 17H00
Dr Laura GLENDINNING
The Roslin Institute and R(D)SVS, University of Edinburgh, UK
Keynote séminaire 2 / Seminar 2 :
The microbiota in commercial and village chickens
17H00 – 17H30
Dr. Sam DUODU University of Ghana, Ghana
Genomic Insights into Klebsiella pneumoniae ST101 clones from Human and Poultry
17H30 – 18H00
Mrs. Nana ADADE University of Ghana, Ghana
Comparative analysis of Vibrio cholerae isolates from Ghana
18H00:
Fin du jour 1 / End of day 1
Programme Jour 2 / Program Day 2 (23.05.2023)
SEMINAR 3 : Extreme Environments Microbial Ecology
08H00 – 08H30
Prof. Thulani MAKHALANYANE
University of Pretoria, South-Africa
Keynote du séminaire 3 / Seminar 3:
Microbial ecology of extreme environments
08H30 – 09H00
Dr. Marcela HERNANDEZ
University of East Anglia, UK
CO oxidizers and soil formation on volcanic rocks
09H00 – 09H30
Dr. Rian PIERNEEF
University of Pretoria, South Africa
The microbiology of arid zones reveals evolutionary adaptation strategies
09H30 – 10H00
Dr. Oliver Bezuidt
University of Pretoria, South Africa
Viral contributions to biogeochemical recycling in remote and pristine marine environments
10H00 – 10H30
Pause-Café / Coffee break
SEMINAR 4 : Marine and Surface Water Ecology and environmental restoration
10H30 – 11H00
Prof. Josh NEUFELD
University of Waterloo, Canada
Keynote du séminaire 4 / Seminar 4 :
Microbes in the water: shining new light on anoxygenic photosynthesis
11H00 – 11H30
Mrs. Nyasha MAFUMO
University of Pretoria, South Africa
Distribution, metabolic potential and function of viral communities in the Agulhas Current and Southern Ocean
11H30 – 12H00
Prof. Blaise Chikéré CHIOMA University of Port Harcourt, Nigerai
Nature-based strategies for eco-restoration of oil-impacted soils in compliance with UN SDGs
12H00 – 13H30
Déjeuner / Lunch
SEMINAR 5 : Microbial community probing
13H30 – 14H00
Prof. Colin MURRELL
University of East Anglia, UK
Keynote du séminaire 5 / Seminar 5:
The Microbial Ecology of Isoprene-Degrading Bacteria
14H00 – 14H30
Prof. Mohammad BAHRAN
Swedish University of Agricultural Sciences, Sweden
Analysis of ecological communities using metabarcoding data
14H30 – 15H00
Dr. Tord Ranheim Sveen
Swedish University of Agricultural Sciences, Sweden
Basic data management & analysis of OTU and taxonomic diversity
15H30 – 16H00
Pause-Café / Coffee break
SEMINAR 6 : The SeqCode
16H00 – 16H30
Prof. Fanus VENTER
University of Pretoria, South Africa
The SeqCode : Bringing stability to microbiome research
16H30 – 16H45
Dr Dominique KOUA & Mrs. Inès YEBOUET, INP-HB, Côte d’Ivoire
DEBRIEFING OF THE SYMPOSIUM (Best practices in microbial ecology study design in omics age; Take home message)
16H45 – 18H00
Team of Bioinformatic Trainers PREPARATION OF THE WORKSHOP (software, data, documents…..)
18H00:
Fin du jour 2 / End of Day 2
Programme Jour 3 / Program Day 3 (24.05.2023)
WORKSHOP COURSE AND PRACTICAL : Session 1
08H00 – 10H00
Dr. Dominique KOUA &
Mr. Anicet EBOU INP-HB, Côte d’Ivoire
Introduction to computational environment and Linux command-line
10H00 – 10H30
Pause-Café / Coffee break
WORKSHOP COURSE AND PRACTICAL : Session 2
10H30 – 12H00
Mr. Anicet EBOU
INP-HB, Côte d’Ivoire
Dr. Noel DAGO
University GBON COULIBALY of Korhogo / Côte d’Ivoire
Introduction to bioinformatics tools and databases on online servers
12H00 – 13H30
Déjeuner / Lunch
WORKSHOP COURSE AND PRACTICAL : Session 3
13H30 – 15H30
Dr. Kessy ABARENKOV
University of Tartu, Estonia
UNITE database and PlutoF data management platform
15H30 – 16H00
Pause-Café / Coffee break
Social event: Yamoussoukro Tour
16H00 – 18H00
Local organizing committee
Visit of important places & monuments of Yamoussoukro
18H00:
Fin du jour 3 / End of Day 3
Programme Jour 4 / Program Day 4 (25.05.2023)
WORKSHOP COURSE AND PRACTICAL : Session 4
08H00 – 10H00
Dr. Rian PIERNEEF &
Dr. Oliver BEZUIDT
University of Pretoria, South Africa
Hands on workshop on data handling (Part 1 : Amplicon data)
10H00 – 10H30
Pause-Café / Coffee break
WORKSHOP COURSE AND PRACTICAL : Session 5
10H30 – 12H00
Dr. Rian PIERNEEF &
Dr. Oliver BEZUIDT
University of Pretoria, South Africa Hands on workshop on data handling (Part 2 : Amplicon data)
12H00 – 13H30
Déjeuner / Lunch
WORKSHOP COURSE AND PRACTICAL : Session 6
13H30 – 15H30
Dr. Romain FOSSOU &
Mrs. Marie-Ange AKAFFOU
INP-HB, Côte d’Ivoire
Multilocus sequence analysis (MLSA) and phylogeny
15H30 – 16H00
Pause-Café / Coffee break
WORKSHOP COURSE AND PRACTICAL : Session 7
16H00 – 18H00
Dr. Rian PIERNEEF
University of Pretoria, South Africa Phylogenomic analysis and genome-based tree reconstruction
18H00:
Fin du jour 4 / End of Day 4
Programme Jour 5 / Program Day 5 (26.05.2023)
WORKSHOP COURSE AND PRACTICAL : Session 8
08H00 – 10H00
Mrs. Anicet EBOU &
Mrs. Emma AMON-BEHOU
INP-HB, Côte d’Ivoire
Ecological statistical analysis of microbial data with R (Part 1)
10H00 – 10H30
Pause-Café / Coffee break
WORKSHOP COURSE AND PRACTICAL : Session 9
10H30 – 12H00
Mrs. Anicet EBOU &
Mrs. Emma AMON-BEHOU
INP-HB, Côte d’Ivoire
Ecological statistical analysis of microbial data with R (Part 2)
12H00 – 13H30
Déjeuner / Lunch
WORKSHOP COURSE AND PRACTICAL : Session 10
13H30 – 15H30
Dr. Dominique KOUA
INP-HB, Côte d’Ivoire
Dr. Noel DAGO
Univ. GBON COULIBALY of Korhogo / Côte d’Ivoire
Microbial dynamics modelling
15H30 – 16H00
Pause-Café / Coffee break
WORKSHOP COURSE AND PRACTICAL : Session 11
16H00 – 18H00
Dr. Sten ANSLAN
Swedish University of Agricultural sciences (Sweden)
Introduction to PipeCraft2: bioinformatics without command-line interface
18H00:
Fin du jour 5 / End of Day 5
